PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun002499
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 300aa    MW: 33836.5 Da    PI: 5.2947
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45967250PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-19760PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.2e-1974122355
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  Vun002499  74 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 122
                9*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.77573130IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-2273131IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.0E-3273131IPR001471AP2/ERF domain
SMARTSM003803.1E-3873136IPR001471AP2/ERF domain
PRINTSPR003677.7E-127485IPR001471AP2/ERF domain
CDDcd000184.58E-3374131No hitNo description
PfamPF008476.1E-1274122IPR001471AP2/ERF domain
PRINTSPR003677.7E-1296112IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MCGGAIIADF IPRRGRCLAA SDIWPSSFGK DDDFGFGYSQ TSNQQTPTVK TAQPPKVSEK  60
VETKPVKRQR KNLYRGIRQR PWGKWAAEIR DPRKGVRVWL GTFNTAEEAA RAYDREARKI  120
RGKKAKVNFP NEDDEYSIQA RNPIPPLPFA TQKPTPYQQQ YRCDLNNAPT NLNFEFGYDL  180
NHTGAFSSHV DSVNADSVVA SGDENSGLAS GSEGAHSTNE FMGSCQKVNG YFNGAVIEKE  240
KEIEVIEAEE EKNKLQELSE ELMAYENYMK FYQIPYYDGQ STMPPNNVQE SVVGDLWNFD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-2274130360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A2e-21741321574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027937225.10.0ethylene-responsive transcription factor RAP2-3-like isoform X1
TrEMBLA0A4D6N3E80.0A0A4D6N3E8_VIGUN; EREBP-like factor
STRINGXP_007145186.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-36ethylene-responsive element binding protein