PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun002541
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 298aa    MW: 33311.5 Da    PI: 10.2137
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45822380PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-26694PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.9e-08183231348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      +WT  E  +lv++v + G g+W+ I r        Rt  ++k++w+++l
        Vun002541 183 AWTLVEVIKLVEGVSRCGAGRWSEIKRLSFasySYRTSVDLKDKWRNLL 231
                      7**************************99999*99************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.948176235IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.0E-11178234IPR009057Homeodomain-like
SuperFamilySSF466893.34E-15178236IPR009057Homeodomain-like
SMARTSM007178.8E-8180233IPR001005SANT/Myb domain
CDDcd116601.68E-19182232No hitNo description
PfamPF002498.0E-6183231IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
XRYIEELSEN ESREHNPRLP ISYKTMELGH VSSTSHVRPA RNTFSEVRTC GTRFDSLGGS  60
DVEIPCVSWI RRSRPRKDMA SLMKFHPAAT SETAKLSNKL IEHSSDALGE IPDKVFKPRM  120
PAKFHQPSSS EPEQEKQSPV IGTIEPRQEL RPKRADPPGH TSDDNIVTVP TAKGGMRRKH  180
HRAWTLVEVI KLVEGVSRCG AGRWSEIKRL SFASYSYRTS VDLKDKWRNL LKASFAMTPA  240
PADEGINSRK HGTAPIPEKI LLRVRELAEM NSQVPPNISS NKVAAGAGSV HEDRSGYL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17076RRSRPRK
27077RRSRPRKD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014516355.10.0uncharacterized protein LOC106774054 isoform X4
TrEMBLA0A4D6MLQ10.0A0A4D6MLQ1_VIGUN; Uncharacterized protein
STRINGXP_007135460.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.14e-61TRF-like 6