PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun002631
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 293aa    MW: 32218.7 Da    PI: 5.7341
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45804489PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-23186PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.47.2e-14121175357
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                elkr rrk +NR +ArrsR+RK+a+++ Le  v++L+ eN +L k+ +  +++  
  Vun002631 121 ELKRLRRKVSNRNSARRSRRRKQAQLADLELQVEKLKVENATLYKQFNDASQHFR 175
                79******************************************99888777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-10119183IPR004827Basic-leucine zipper domain
PfamPF001701.1E-11121171IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.806121184IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.5E-9122173No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-7123159No hitNo description
PROSITE patternPS000360126141IPR004827Basic-leucine zipper domain
CDDcd147026.14E-7140175No hitNo description
Gene3DG3DSA:1.20.5.101.7E-4160193No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MTTTESDLDN DFPNLDELRY LNLAGTDVFA AFQNLLPDAM TSFSTCGLTD PFSSQNLTPK  60
HSTITATIDS RSSICGTANV GSPVSANKPE GWKNHTKGTT SGSSDPSDED GPCEQSTNSV  120
ELKRLRRKVS NRNSARRSRR RKQAQLADLE LQVEKLKVEN ATLYKQFNDA SQHFREADTN  180
NRVLKSDVEA LRAKVKLAED MVTRGSFTTL NNQLLPTQCQ MNTPPPLNTT NLRRMAQVSP  240
TITVHGNDGS YNDATVCVQN SDLGNLDMNF NDMNNVNGVM SDGMSCGSIW PPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125141RRKVSNRNSARRSRRRK
2135142RRSRRRKQ
3137142SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027904392.10.0basic leucine zipper 9-like
SwissprotQ9FUD32e-54BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A4D6NRY40.0A0A4D6NRY4_VIGUN; Plant G-box-binding factor
STRINGXP_007137151.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.15e-39basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]