PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun002742

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 288aa MW: 32166.8 Da PI: 5.8242

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-167a-Vigna_unguiculata-30742	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.9	5.8e-10	94	151	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK ++ eLe+k+++L++e ++L +l+ + l se Vun002742 94 KRAKRILANRQSAARSKERKACYVSELERKFQSLQTEATTLSAQLSLFQRDTTGLSSE 151 9*****************************************9999887776666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.2E-15	90	154	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.3	92	155	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.6E-10	94	149	No hit	No description
SuperFamily	SSF57959	6.26E-10	94	148	No hit	No description
Pfam	PF00170	6.2E-9	94	152	IPR004827	Basic-leucine zipper domain
CDD	cd14703	6.04E-21	95	144	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence Send to blast
MSFAHHRRTQ SEMLFRINDD FDLEVDLSPP HFQDPTPPNQ SGPKPESPPH ETARSGHRRS 60 NSADTSSSSQ LEGIEAKKAL SPDKLAELWT VDPKRAKRIL ANRQSAARSK ERKACYVSEL 120 ERKFQSLQTE ATTLSAQLSL FQRDTTGLSS ENTELKLRLQ AMEQQAKLCD ALNEALKKEL 180 DRLRIATGEI AMPADNYGLG MHQLTYSQGP FFSHQPQHGQ SAFQATQMPQ MHSLSSNVST 240 SNEPLFDLDI PYDMSEMLSN ESIGQFQGLD IGNGVSQVLI PDYPSNFC

Functional Description ? help Back to Top
Source	Description
UniProt	Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269\|PubMed:27896439}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027902877.1	0.0	bZIP transcription factor 18
Swissprot	O22873	4e-74	BZP18_ARATH; bZIP transcription factor 18
TrEMBL	A0A4D6NUA6	0.0	A0A4D6NUA6_VIGUN; Uncharacterized protein
STRING	XP_007137632.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40620.1	6e-74	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Pawar V, et al. A novel family of plant nuclear envelope-associated proteins. J. Exp. Bot., 2016. 67(19): p. 5699-5710 [PMID:27630107] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S Efficient gene tagging in Arabidopsis thaliana using a gene trap approach. Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7 [PMID:9356517]