PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun002746
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 288aa    MW: 31893.5 Da    PI: 5.0207
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45901791PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-5935363PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20109159256
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 y+GVr+++ +g+WvAeIr p++   r+r +lg+f taeeAa a+++a+ kl+ge
  Vun002746 109 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFETAEEAALAYDNAAFKLRGE 159
                59******9.**********965...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.68E-36108168No hitNo description
SuperFamilySSF541712.75E-23109167IPR016177DNA-binding domain
SMARTSM003802.1E-40109172IPR001471AP2/ERF domain
PROSITE profilePS5103223.617109166IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-33109167IPR001471AP2/ERF domain
PRINTSPR003673.2E-11110121IPR001471AP2/ERF domain
PfamPF008472.9E-14110159IPR001471AP2/ERF domain
PRINTSPR003673.2E-11132148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MDMYDNSSIV LSDFLDPCND QELMKALEPF MKTDSSITYP SLSSPNFSSG YDQKPLNQAS  60
SFKLNQLTPS QTFQIQAQIQ VTRAQFLSPK PVPMKQVGGG RVVSRPTKLY RGVRQRHWGK  120
WVAEIRLPKN RTRLWLGTFE TAEEAALAYD NAAFKLRGEN ARLNFPHLRH HGTSVYGEFG  180
TYKPLPSAVD AKLQAICQSL AVTTHKEETA TTSEFEDVKV GIQTASSPLT DEYSSSSSSS  240
SSAGSSSPES DITFLDFSDS YEAMDNLGLD LEKYPSVEID WAALSESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-23108166160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027902466.10.0ethylene-responsive transcription factor ERF060-like
SwissprotO656657e-77ERF60_ARATH; Ethylene-responsive transcription factor ERF060
TrEMBLA0A4D6MBC30.0A0A4D6MBC3_VIGUN; EREBP-like factor
STRINGXP_007163638.11e-163(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.12e-63ERF family protein