PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun003057

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

G2-like

Protein Properties

Length: 275aa MW: 30170.7 Da PI: 9.196

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45962690	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-507	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.7	2.6e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Vun003057 46 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 100 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	11.884	43	103	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	3.8E-32	44	101	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.4E-17	45	100	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.4E-26	46	101	IPR006447	Myb domain, plants
Pfam	PF00249	1.4E-7	48	99	IPR001005	SANT/Myb domain
Pfam	PF14379	9.7E-25	134	180	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence Send to blast
MYHAKKFSSP GMVPYKSQAG AEQLANVEVL GGSAAKNATP AGGSGKQRLR WTSDLHDRFV 60 DAITQLGGPD RATPKGVLRV MGVPGLTIYH VKSHLQKYRL AKYLPESPAD GKDSKDEKRN 120 SGDSFSGADS SPGMPINDAL RMQMEVQKRL HEQLEVQKQL QMRIEAQGKY LQKIIEEQQK 180 LGNTLTTSET LPSSHDKQTH PHSEASGSSD ALASTLSPRK KQRIDDGSKD GFTASHVRKT 240 EQKNECNVGQ LDPNLYDDAG FGFDLETNKH KESGQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	6e-23	45	103	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	6e-23	45	103	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	6e-23	45	103	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	6e-23	45	103	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	6e-23	45	103	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	6e-23	45	103	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	6e-23	45	103	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	6e-23	45	103	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027942244.1	0.0	myb family transcription factor PHL7-like isoform X1
Swissprot	Q9SJW0	4e-71	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A4D6M9J7	0.0	A0A4D6M9J7_VIGUN; Two-component response regulator ARR-B family
STRING	XP_007161823.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	2e-73	G2-like family protein