PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun003076
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family GeBP
Protein Properties Length: 274aa    MW: 30347.3 Da    PI: 9.7034
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45798326PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-35295PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731055.7e-3325124198
     DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                k+fqrlwseeDe+++L+Gl +f++ktg +p +    +af++f+kks++++v+++ql eK rrLKkK+++   + +s +  +f+k+hdqk+felskk+Wgs
  Vun003076  25 KKFQRLWSEEDELAILKGLAEFTSKTGHDPLKfaGGNAFHDFLKKSLHVEVTSNQLKEKARRLKKKYETAAVRGNSADGLTFAKPHDQKTFELSKKVWGS 124
                68**************************88765599**************************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045048.6E-3227123IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
GDSSSSPAAS DEEMEDGKKS GDQMKKFQRL WSEEDELAIL KGLAEFTSKT GHDPLKFAGG  60
NAFHDFLKKS LHVEVTSNQL KEKARRLKKK YETAAVRGNS ADGLTFAKPH DQKTFELSKK  120
VWGSEQDGGV ANGTVEKPKA NGNAAKSPKK KETGSRNVAS AKKAKPEPKQ ETVPATRIEL  180
KESEKMNIDQ KPVHCEVSMF LNALSHFKEG LGVCGLDEED VKKGLELIGE SKRTELRAKW  240
KKLQRTELEL FANRSELIGE QTKLIVEALR SSNH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027931145.10.0GLABROUS1 enhancer-binding protein-like
TrEMBLA0A4D6KH550.0A0A4D6KH55_VIGUN; Uncharacterized protein
STRINGXP_007148295.11e-163(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.12e-31DNA-binding storekeeper protein-related transcriptional regulator