PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun003282
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family GATA
Protein Properties Length: 264aa    MW: 29301.1 Da    PI: 8.0547
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45923765PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-7617PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.51.6e-17197231135
       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                Cs+C +  Tp+WR gp g+ktLCnaCG++y++ +l
  Vun003282 197 CSHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 231
                *******************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011411.345191227IPR000679Zinc finger, GATA-type
SMARTSM004015.8E-15191245IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.43E-14194255No hitNo description
Gene3DG3DSA:3.30.50.101.2E-13195229IPR013088Zinc finger, NHR/GATA-type
CDDcd002024.47E-11196243No hitNo description
PfamPF003203.0E-15197231IPR000679Zinc finger, GATA-type
PROSITE patternPS003440197222IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MNMCQNVSVT TERHQDQVFA PSCSSSLDDL FSAQNTEVDV ELEWLSEFVE DCFSSPPSFV  60
LGGGGTKSTS ISISTSSSNP CCSGTLKRPQ QQNESPLQSF SVPGKARSKR KRLSAPRRKD  120
PLSIWSQHLN PQNEALSCDP PLLKQAYWLA DSELMMPKPK EEKEVSEVVE KSKESFGECE  180
VEGSSSGEQA AAMARRCSHC LAQRTPQWRA GPLGPKTLCN ACGVRYKSGR LLPEYRPAKS  240
PTFVSYLHSN SHKKVMEMRM TQHH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027916633.10.0GATA transcription factor 9-like
TrEMBLA0A4D6M7K60.0A0A4D6M7K6_VIGUN; Uncharacterized protein
STRINGXP_007161927.11e-150(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.15e-38GATA transcription factor 9