PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun003348
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 261aa    MW: 29663.3 Da    PI: 8.1148
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45799288PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-33774PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.1e-1387139155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                ++ +hn+ Er RR+++N+  + Lr+llP a   + kK+s  +++ ++ +YI +Lq
  Vun003348  87 KKLSHNASERDRRKKVNNLVSSLRSLLPMA--DQTKKMSIPATVSRVLKYIPELQ 139
                6789*************************6..48888***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.786138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-1087139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.04E-1187143No hitNo description
Gene3DG3DSA:4.10.280.104.7E-1287154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-1587157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.5E-1092144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
GLTNLLTAPN KSSSFIMVAL FSPPLFSTKG WLLEEEPFGY NNTHNLSYKD DASSQYSFPY  60
QFYSPQTQIE VEIERSTAPS SDPAMVKKLS HNASERDRRK KVNNLVSSLR SLLPMADQTK  120
KMSIPATVSR VLKYIPELQQ QVQALTKRKE ELLCRISRQL QGEAVNKEPQ RKISHHNSSF  180
VVSTTRLNDC EAVVHISSHE THKAPLSEIL QCLENDGLFS AHASSSETFG GRFFYNLHFH  240
VEKTDRLETE ILTEKLLPIY X
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027919626.11e-178transcription factor ORG2-like
TrEMBLA0A4D6M8J21e-177A0A4D6M8J2_VIGUN; Achaete-scute transcription factor-related
STRINGXP_007162129.11e-155(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-46bHLH family protein