PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun003440
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family GeBP
Protein Properties Length: 257aa    MW: 28917.8 Da    PI: 4.429
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45856815PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-17799PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573123.88.1e-39108203297
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                lfqrlw++eDei lLqG++d+++++g+s ++d+  fy+++k++++++++k+qlveKirrLKkK+++  +k+ sgke+sf+++hdq +fe+s+kiW 
  Vun003440 108 LFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWS 203
                79*********************************************************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.4E-35109203IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MASQQHDAVF REEDMDDEDD ESQEDEEFEE DDDVLPADDE ENEPSPSAAL AVTVAVPGSA  60
ISNGGAAPLS TPTATTIVIG DSSDPKRRRV EPIEEKKPPP PLDDSRRLFQ RLWTDEDEIE  120
LLQGFLDYTS QRGSSHHNDT ALFYDQIKSK LQLDFNKNQL VEKIRRLKKK YRNVLNKIGS  180
GKEFSFKSAH DQATFEISRK IWSSVAPIGE NSLDDDEINL CPNPNPIPHP NLNFSPVILK  240
NETTSRNSAE KKTPKRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18589KRRRV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027931845.10.0probable transcription factor At3g04930
SwissprotQ9CAV73e-60STKLJ_ARATH; Probable transcription factor At3g04930
TrEMBLA0A4D6KPU00.0A0A4D6KPU0_VIGUN; Uncharacterized protein
STRINGGLYMA19G43180.11e-143(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.21e-54DNA-binding storekeeper protein-related transcriptional regulator