PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun003599

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

ERF

Protein Properties

Length: 252aa MW: 28048.5 Da PI: 8.3113

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45799371	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-7251	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	65.5	1e-20	111	161	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + k r++lg+f+ta eAaka+++a+ k++g Vun003599 111 HYRGVRRRP-WGKFAAEIRDP---NrKGSRVWLGTFDTAIEAAKAYDKAAFKMRG 161 8******.******9...6566***********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00018	3.64E-32	110	169	No hit	No description
Gene3D	G3DSA:3.30.730.10	5.9E-33	110	170	IPR001471	AP2/ERF domain
Pfam	PF00847	7.0E-15	111	161	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	3.66E-23	111	171	IPR016177	DNA-binding domain
PROSITE profile	PS51032	24.474	111	169	IPR001471	AP2/ERF domain
SMART	SM00380	4.7E-39	111	175	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.3E-13	112	123	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.3E-13	151	171	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence Send to blast
MQTFEPNNFT FFIPNITDYS LPQDLQFQAH MTNNNNNTPM NQVSSSSKPP RSSNLSNRKP 60 SLKNITIPSI SSGLVIPTTS STTSITTLYN SNSQVSCSLD DANNSREDDK HYRGVRRRPW 120 GKFAAEIRDP NRKGSRVWLG TFDTAIEAAK AYDKAAFKMR GSKAILNFPL EVGESEESVS 180 IMKVGVKRER EEESEGNEES NNNNKVVKKE ECSPKGVCPL TPSCWKGFWD TDVMGTIFSV 240 PPLSPLSPLM VV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1gcc_A	1e-32	110	172	1	63	ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A	1e-32	110	176	4	70	ATERF1
3gcc_A	1e-32	110	176	4	70	ATERF1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027937089.1	0.0	ethylene-responsive transcription factor ERF105
TrEMBL	A0A4D6MVK5	1e-160	A0A4D6MVK5_VIGUN; EREBP-like factor
STRING	XP_007145468.1	1e-132	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51190.1	1e-33	ERF family protein