PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun003643
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 250aa    MW: 27053.1 Da    PI: 8.4668
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-35115PU_refplantGDBView CDS
PUT-167a-Vigna_unguiculata-35116PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.47.9e-11133180455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Vun003643 133 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 180
                8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.33E-18127197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.19E-10127184No hitNo description
PROSITE profilePS5088815.828129179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.0E-18129197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-8133180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10135185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MDPAANTTSY NLSEIWQFPP PHAPDATAAL GLSRAHFGHG LGPGSIGHKK RRDAEEEESA  60
KGVSTSNGVK EGGGGGDGKR VKTTGNQKSE SAKGEGESSS GKLAEQGGKP PSEPPSKQDY  120
IHVRARRGQA TDSHSLAERA RREKISERMK ILQDLVPGCN KVIGKALVLD EIINYIQSLQ  180
RQVEFLSMKL EAVNSRIPSG IEVFPPKDFD QQTFDTTGIV FASQPTREYS RGSSPEWLHM  240
QVGTGFERAT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027914013.10.0transcription factor BHLH089-like
SwissprotQ69WS31e-75BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A4D6LRC60.0A0A4D6LRC6_VIGUN; Phytochrome-interacting factor 3
STRINGXP_007157558.11e-157(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-82BIG PETAL P