PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun003692
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 248aa    MW: 28267.2 Da    PI: 5.0885
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45799403PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-31105PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.62.6e-1458101755
                HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  Er+RR+++N++++ Lr+++P+ +      K++Ka+i + A++YI++L+
  Vun003692  58 VSERNRRKKLNERLFALRSVVPNiS------KMDKASIIKDAIDYIQHLH 101
                57*********************66......*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.76851100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.58E-1854116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.65E-1454105No hitNo description
SMARTSM003536.0E-1657106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.1E-1757116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.6E-1258100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MENMENIGEE YKHYWETTMF LQTQELDSNW GFEEALSGYY DSSSPDGAAS TAASKNIVSE  60
RNRRKKLNER LFALRSVVPN ISKMDKASII KDAIDYIQHL HEQEKIIQAE IMDLESGMPK  120
KSGSSYDFEQ EQLPVVLRSK KKRTEQIYDS VISRNSPIEV LDLSVTYMGE KIAVVSLTCS  180
KRTDTMVKLC EVFESFKLKI ITANITSFSG RLLKTVFIEA NDEDKYHLEI KIQTAIAALN  240
EPLSPMSI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027903294.10.0transcription factor bHLH35-like
SwissprotQ2HIV95e-91BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A0L9UAY21e-176A0A0L9UAY2_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RHT31e-176A0A0S3RHT3_PHAAN; Uncharacterized protein
STRINGXP_007138769.11e-161(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-92bHLH family protein