PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun004221
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 231aa    MW: 25324 Da    PI: 6.5637
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45939633PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-5964PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.31.4e-2286148163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN +Lk+e+ +l++ ++++++e+
  Vun004221  86 ERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITKLTEGSEQMRMEN 148
                89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.0E-1780145No hitNo description
SMARTSM003382.7E-2186150IPR004827Basic-leucine zipper domain
PfamPF001702.8E-2186148IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.08288151IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.19E-1189144No hitNo description
CDDcd147025.50E-1791139No hitNo description
PROSITE patternPS00036093108IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
XTSPTDGEGK TETQDGPISK ETASSKMIMP ATPASIAGKF VGPVISSGMT TALELRNSLT  60
VHSKENLTSA PQPCAAVPPE AWLQNERELK RERRKQSNRE SARRSRLRKQ AETEELARKV  120
EMLTAENVSL KSEITKLTEG SEQMRMENSA LREKLINTQL GQREEIILDS IDSKRSTPVS  180
TENLLSRVNN SSSNDRSADT ESDFCENKPN SGAKLHQLLD TNPRADAVAA G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102108RRSRLRK
2102109RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027908271.11e-162common plant regulatory factor 1-like isoform X4
SwissprotQ990899e-63CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A4D6MR711e-160A0A4D6MR71_VIGUN; Plant G-box-binding factor
STRINGXP_007135192.11e-151(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.13e-42G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]