PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun004240
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 230aa    MW: 26285.3 Da    PI: 4.8012
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45847178PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-25888PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.4e-12166211655
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +++Er RR ri +++ +L+el+P+     +k  + a++L +Av Y+k Lq
  Vun004240 166 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLDEAVAYVKFLQ 211
                689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.583160210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-16163228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.90E-10164215No hitNo description
Gene3DG3DSA:4.10.280.105.2E-16165224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.7E-13166216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-9166211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
XERTEAVFCY ALLHHRAHNT ITLSSITTTA EDQGKPAEER AMQPKSAARL SSFRSTPASW  60
LESVLLKEED EEEEVEEEES QEAEEEPLSF TQLLSTIAAP SPSQRYDTQD YPPTPMPVPM  120
SIPNSIATKE LYASASDIKM DTMFTFEDSV PCRVRAKRGC ATHPRSIAER VRRTRISDRI  180
RKLQELVPNM DKQTNTADML DEAVAYVKFL QKQIEELTEH QRRCRCMVQE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027910604.11e-136transcription factor bHLH80-like isoform X3
TrEMBLA0A1S3TJW81e-110A0A1S3TJW8_VIGRR; transcription factor bHLH80
STRINGXP_007131294.13e-88(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.12e-39bHLH family protein