PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun004249
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 230aa    MW: 25045.7 Da    PI: 6.8961
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45830718PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-9339PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_153.64.8e-173085358
               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
               + kr rr+ +NRe+ArrsR+RK+a +  Le+ v +L +eN++L k+l   ++++++
  Vun004249 30 DAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSE 85
               689******************************************99999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-192892IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.4153085IPR004827Basic-leucine zipper domain
PfamPF001708.9E-153184IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.53E-123282No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-133284No hitNo description
CDDcd147026.48E-73384No hitNo description
PROSITE patternPS0003603550IPR004827Basic-leucine zipper domain
PfamPF124981.1E-4299219IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
RPSTSGSSRE LSDDDDAEGE TSMNDMDPAD AKRVRRMLSN RESARRSRRR KQAHLTDLET  60
QVSQLRGENS TLLKRLTDVS QKYSESAVDN RVLKADVETL RAKVKMAEET VKRITGLNPM  120
VHAMSGMPLF DGRSPSDTSA DAAVPVQDDH HHFYQPTSNT PIPSHDPIVN DGLGGMSSIE  180
NVQQQNSAAV AGGNKMGQTG SLQRVASLEH LQKRIRGGVD SCGPPSNGEQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14451RRSRRRKQ
24651SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027936556.11e-168light-inducible protein CPRF2-like
SwissprotQ990902e-76CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A4D6N3H71e-166A0A4D6N3H7_VIGUN; Extracellular signal-regulated kinase 1/2
STRINGXP_007144827.11e-142(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.15e-51bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]