PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun004395
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 224aa    MW: 25158.5 Da    PI: 5.9711
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45820712PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-14101PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.4e-12115161455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h + Er+RR+++  +f  L + +P +     kK++Ka +L++A++Y+k+Lq
  Vun004395 115 DHIMSERKRRQELTRKFIALASTIPGL-----KKMDKAHVLREAINYVKQLQ 161
                6999***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.104111160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.9E-17115178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-16116173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.37E-12116165No hitNo description
PfamPF000104.7E-10116161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.9E-13117166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MEDEVLNECL CQTNPIDEEF LRDILQQPQE GPDLNTFGGA DKLMMKNTNS SMMNLCGENK  60
NKPTTSPTTY VLSFDKSADP HPLSAWKDVS HNLPLSSART NQGTKKTRSA SESMDHIMSE  120
RKRRQELTRK FIALASTIPG LKKMDKAHVL REAINYVKQL QERVEVLEED IQKNGAESAI  180
TVTRSHLCID DTKSDEWYGS NEAVPAEVEA RVLGKQVLIK IHCG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119124ERKRRQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027929891.11e-168transcription factor bHLH18-like
TrEMBLA0A4D6NA601e-167A0A4D6NA60_VIGUN; Transcription factor MYC2
STRINGXP_007150796.11e-105(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.28e-28bHLH family protein