PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun004419
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 223aa    MW: 24402.7 Da    PI: 10.0726
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45823327PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-19203PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.1e-11104151455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++YI+sLq
  Vun004419 104 SHSLAERARREKISERMKILQDLVPGC----SKVIGKALVLDEIINYIQSLQ 151
                8*************************9....566*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.10E-1098155No hitNo description
SuperFamilySSF474599.03E-1898168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.834100150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-18100168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-8104151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-10106156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MEPPLINDAT FSSANPSLSE IWPSQFPSSN KRPSSLLLHN HSPNSNKHVK LSPSPSETHQ  60
NAALQPPQPD ATSVAAAHKS PLQTPKPKLD YIHVRARRGQ ATDSHSLAER ARREKISERM  120
KILQDLVPGC SKVIGKALVL DEIINYIQSL QRQVEFLSMK LEAVNSRLSI SPSIESFPSK  180
EVGTQPFDLS GIIFGSQPAR GFAQGSQAGW LHMQIAGGFE KVT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027915479.11e-163transcription factor bHLH79
SwissprotQ69WS33e-66BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A4D6KTV31e-161A0A4D6KTV3_VIGUN; Phytochrome-interacting factor 3
STRINGGLYMA17G10290.11e-115(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-70BIG PETAL P