PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun004583

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

NAC

Protein Properties

Length: 218aa MW: 24626.2 Da PI: 9.2606

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45831660	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-19956	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	81.2	2.2e-25	28	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel. 99 lp+G+rF+Ptd l +yL+k+++g++l+ i + d++++ePw+Lp k + + +fF + + ++ ++r + +g W+ kd+ev +++l Vun004583 28 LPVGYRFDPTDPVLAGYYLTKRLRGHPLPN-GLILDYDVHQTEPWELPGGGKFMNWQKFFFYNVKGLNP----EKRDAGKGQWEMVEKDEEVEFYDEQLa 122 799**********************999.89***********543333335588877766654....6888999********98766556 PP NAM 100 ..vglkktLvfykgrapkgektdWvmheyrl 128 + k +Lvf+k + ++ kt+Wvmhe+rl Vun004583 123 plTAKKSVLVFWKSKGNSLAKTKWVMHEFRL 153 76888999*******************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.84E-30	24	172	IPR003441	NAC domain
PROSITE profile	PS51005	32.452	28	173	IPR003441	NAC domain
Pfam	PF02365	5.0E-15	29	153	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence Send to blast
GSLQSQKVFG VASLMEVFNP VEGKTYKLPV GYRFDPTDPV LAGYYLTKRL RGHPLPNGLI 60 LDYDVHQTEP WELPGGGKFM NWQKFFFYNV KGLNPEKRDA GKGQWEMVEK DEEVEFYDEQ 120 LAPLTAKKSV LVFWKSKGNS LAKTKWVMHE FRLALKSNPS KMSAMGVCRI FERKTSKRAK 180 RARVSTEGVS NAEEAMEVID FTVECGTETS PPPPPGTP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	6e-16	28	176	17	168	NO APICAL MERISTEM PROTEIN
1ut4_B	6e-16	28	176	17	168	NO APICAL MERISTEM PROTEIN
1ut7_A	6e-16	28	176	17	168	NO APICAL MERISTEM PROTEIN
1ut7_B	6e-16	28	176	17	168	NO APICAL MERISTEM PROTEIN
3swm_A	6e-16	28	176	20	171	NAC domain-containing protein 19
3swm_B	6e-16	28	176	20	171	NAC domain-containing protein 19
3swm_C	6e-16	28	176	20	171	NAC domain-containing protein 19
3swm_D	6e-16	28	176	20	171	NAC domain-containing protein 19
3swp_A	6e-16	28	176	20	171	NAC domain-containing protein 19
3swp_B	6e-16	28	176	20	171	NAC domain-containing protein 19
3swp_C	6e-16	28	176	20	171	NAC domain-containing protein 19
3swp_D	6e-16	28	176	20	171	NAC domain-containing protein 19
4dul_A	6e-16	28	176	17	168	NAC domain-containing protein 19
4dul_B	6e-16	28	176	17	168	NAC domain-containing protein 19
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027920185.1	1e-151	NAC domain-containing protein 83-like
TrEMBL	A0A4D6M7Y2	1e-150	A0A4D6M7Y2_VIGUN; Uncharacterized protein
STRING	XP_007161703.1	2e-95	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-22	NAC domain containing protein 38