PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun004630

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

G2-like

Protein Properties

Length: 216aa MW: 23238.6 Da PI: 9.7032

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45962550	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-17930	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.9	1e-32	43	98	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+++LH+rF++a++qLGG++ AtPk+i+elm+v+gLt+++vkSHLQkYRl+ Vun004630 43 KQRRCWSQDLHKRFLHALQQLGGADSATPKQIRELMNVDGLTNDEVKSHLQKYRLH 98 79****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	12.598	40	100	IPR017930	Myb domain
SuperFamily	SSF46689	8.96E-19	41	101	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	7.3E-30	41	101	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	7.6E-28	43	98	IPR006447	Myb domain, plants
Pfam	PF00249	9.5E-8	45	96	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence Send to blast
KEENAAKATE SSCKAPSLTL VAAASSSAGE LTPEKNQSEG QRKQRRCWSQ DLHKRFLHAL 60 QQLGGADSAT PKQIRELMNV DGLTNDEVKS HLQKYRLHTR RPSPLVHNSS SQQAAPFVLV 120 GNIFVQSPEY AAVATSTASR EVNTVPAPAG VYAPVATHPT PVSQPSADSI KKPQFKKFKH 180 SEHSNSDERA HHSEGAVHSN SPTSSSSTHT SASPGY

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027934545.1	1e-154	transcription factor HHO3-like
Swissprot	Q9FPE8	5e-38	HHO3_ARATH; Transcription factor HHO3
TrEMBL	A0A4D6N3K1	1e-153	A0A4D6N3K1_VIGUN; Two-component response regulator ARR-B family
STRING	XP_007143802.1	1e-128	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13300.1	7e-38	G2-like family protein

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]