PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun004712
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 214aa    MW: 23987.8 Da    PI: 6.7243
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45820328PU_refUnigeneView CDS
PUT-167a-Vigna_unguiculata-17231PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-19120171256
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                +y+GVr+++ +g+++AeIrdp+     +r++lg+f+t+ +Aaka++ a+ k++g+
  Vun004712 120 RYRGVRRRP-WGKFAAEIRDPTRK--GTRVWLGTFDTEIDAAKAYDSAAFKMRGH 171
                8********.**********8542..4**********99**************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.79E-31119178No hitNo description
SMARTSM003807.0E-36120184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-32120179IPR001471AP2/ERF domain
PROSITE profilePS5103224.54120178IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-23120179IPR016177DNA-binding domain
PfamPF008472.6E-14120171IPR001471AP2/ERF domain
PRINTSPR003673.6E-13121132IPR001471AP2/ERF domain
PRINTSPR003673.6E-13160180IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
GKMTTAEETS NLDLISQHLL GENISTSFFS NFSNLNPVKL EAPSSPSSPH FDFDFSDNTT  60
FFTFLEGYDL VADMEFLDHK TIINSTSTPP LNKCNSPQPL VSSSESEEKA KKVEHDEAKR  120
YRGVRRRPWG KFAAEIRDPT RKGTRVWLGT FDTEIDAAKA YDSAAFKMRG HKAILNFPLE  180
AGVSDPKPNT CGRKRSRDTL ELELPQVHLH HGVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-29119179161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A1e-28117179264ATERF1
3gcc_A1e-28117179264ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027934861.11e-156ethylene-responsive transcription factor ERF107-like
TrEMBLA0A4D6MZB21e-155A0A4D6MZB2_VIGUN; EREBP-like factor
STRINGXP_007145470.11e-119(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.15e-37ERF family protein