PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun004722
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 213aa    MW: 23628.5 Da    PI: 10.1944
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45937380PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-23637PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.23e-212271255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  Vun004722 22 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAARNFRG 71
               6********.**********8...557************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.4E-392285IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-332279IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-232280IPR016177DNA-binding domain
PROSITE profilePS5103224.212279IPR001471AP2/ERF domain
PfamPF008471.0E-142271IPR001471AP2/ERF domain
CDDcd000189.85E-192279No hitNo description
PRINTSPR003671.3E-112334IPR001471AP2/ERF domain
PRINTSPR003671.3E-114561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MVAKDKTVIK NKKPNNAADE VHYRGVRKRP WGRYAAEIRD PGKKSRVWLG TFDTAEEAAR  60
AYDAAARNFR GPKAKTNFPL LPDTAAAAAA NNINNLNRNN NNNITNNASS SSSPSQSSTV  120
ESATPERDVT RRAATAVIDR FPFLPIQQQL LVTPVAPVRP VFLLDRAHYL THQFPFRFEP  180
APVQSDSDSS SVVDCQPKRE LNLDLNLAPP MDY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-222280261ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A5e-222280564ATERF1
3gcc_A5e-222280564ATERF1
5wx9_A1e-211779972Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027908827.11e-155ethylene-responsive transcription factor 9-like
TrEMBLA0A4D6LGB91e-153A0A4D6LGB9_VIGUN; EREBP-like factor
STRINGXP_007132794.13e-93(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.17e-33erf domain protein 9