PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun004950
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 204aa    MW: 23000.4 Da    PI: 9.6671
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45813548PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-25412PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.4e-164291255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++ GVr+++ +grW AeI+d s   ++ r +lg+f+ aeeAa a++ a++ l+g
  Vun004950 42 KFLGVRQRP-SGRWIAEIKDSS---QKLRLWLGTFDKAEEAAMAYDCAARLLRG 91
               789******.7*********42...36**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.65E-3141100No hitNo description
Gene3DG3DSA:3.30.730.101.1E-2742100IPR001471AP2/ERF domain
PROSITE profilePS5103219.7964299IPR001471AP2/ERF domain
SMARTSM003801.2E-3142105IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-194299IPR016177DNA-binding domain
PfamPF008474.6E-104391IPR001471AP2/ERF domain
PRINTSPR003674.5E-74354IPR001471AP2/ERF domain
PRINTSPR003674.5E-76581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MENIGTSELS HQSQNQNKNL PMMPYEKRVM KIPKVGKKIE KKFLGVRQRP SGRWIAEIKD  60
SSQKLRLWLG TFDKAEEAAM AYDCAARLLR GRNAKTNFPN PGIMNTHEQD YYSILGKNPR  120
SYQLLKHAVM KNHALSASLY STFMPWKNQI MMRDEHDILV EETVVCSIPE QGSACCGISY  180
GSSKVYSSVV VAPSFGVSSH DVTP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-154199160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A1e-14421001473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027920884.11e-154ethylene-responsive transcription factor SHINE 3-like
TrEMBLA0A4D6KVI61e-136A0A4D6KVI6_VIGUN; EREBP-like factor
STRINGXP_007155177.11e-124(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-18related to AP2 11