PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun005093
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family DBB
Protein Properties Length: 199aa    MW: 21770.7 Da    PI: 7.186
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45819984PU_refUnigeneView CDS
PUT-167a-Vigna_unguiculata-8898PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.51.2e-071647334
   zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeH 34
               ++ C+ +e+  ++ fC  ++  lC+ C ++ H
  Vun005093 16 AKLCDACESAAAIVFCAADEAALCRACDEKVH 47
               578**************************998 PP
2zf-B_box30.76.5e-1066105237
   zf-B_box   2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 
                + ++C+ +e+ ++ ++Ce++++ lC +C +  H g    H
  Vun005093  66 DVPRCDICENAPAFFYCETDGSSLCLQCDMIVHVGgkrtH 105
                5799**************************9995544455 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.2531461IPR000315B-box-type zinc finger
SMARTSM003363.2E-91461IPR000315B-box-type zinc finger
PfamPF006436.6E-61655IPR000315B-box-type zinc finger
CDDcd000211.08E-61859No hitNo description
SuperFamilySSF578451.05E-562100No hitNo description
PROSITE profilePS501199.15865110IPR000315B-box-type zinc finger
SMARTSM003362.1E-1165110IPR000315B-box-type zinc finger
PfamPF006431.0E-76699IPR000315B-box-type zinc finger
CDDcd000211.45E-76898No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
GYPHGFAMKV GESSYAKLCD ACESAAAIVF CAADEAALCR ACDEKVHMCN KLASRHVRVG  60
LASPSDVPRC DICENAPAFF YCETDGSSLC LQCDMIVHVG GKRTHGRYLL FRQRVEFPGD  120
KSSHAENPGS QALEPGESKR GQNPLPKLRM GEKQQNHVMP LLPTPGSDAD GHTKMETKMI  180
DLNMKPNNRL HEQASNNQP
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027907919.11e-135B-box zinc finger protein 18-like isoform X3
SwissprotC0SVM56e-69BBX19_ARATH; B-box zinc finger protein 19
TrEMBLA0A4D6LRG11e-133A0A4D6LRG1_VIGUN; Zinc finger protein CONSTANS
STRINGXP_007157945.11e-128(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.13e-71DBB family protein