PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun005124
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 197aa    MW: 22329.1 Da    PI: 7.8083
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45880629PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-14597PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.61.2e-28117175159
                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                +dDgy+WrKYG+K+vk+s++ r+YY+C+s gC+vkk+ver++ed ++v++tYeg Hnh+
  Vun005124 117 MDDGYKWRKYGKKSVKSSPNLRNYYKCSSGGCSVKKRVERDREDSSYVITTYEGVHNHQ 175
                59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.7E-32104177IPR003657WRKY domain
SuperFamilySSF1182901.57E-26109177IPR003657WRKY domain
PROSITE profilePS5081129.998112177IPR003657WRKY domain
SMARTSM007741.5E-31117176IPR003657WRKY domain
PfamPF031061.7E-22118175IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
XLPMDFFYFE NPHPSNSHDH HLHNNMPPSS PEIALSDFLL LDDFLHHHHH HGDSPPSSQS  60
TESSEKPTFS DTTHGFTTGA TSKNNNNNIK CKNANSGSKA RLGPRIAFRT QSELEIMDDG  120
YKWRKYGKKS VKSSPNLRNY YKCSSGGCSV KKRVERDRED SSYVITTYEG VHNHQSPFTT  180
YYSPISFLHS DDSTSSK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-24105177274WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027918288.11e-142probable WRKY transcription factor 51
TrEMBLA0A4D6L8F91e-112A0A4D6L8F9_VIGUN; WRKY transcription factor 33
STRINGGLYMA05G31800.12e-88(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-40WRKY DNA-binding protein 51