PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun005168
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 196aa    MW: 22362.3 Da    PI: 9.7911
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45914779PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-26937PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.57.3e-25124184259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                dD  +WrKYGqK++ +s+fprsY+rCt +   gC+++k+v+r +e+p++ +itY g H+++
  Vun005168 124 DDNRAWRKYGQKDILNSQFPRSYFRCTRKyeqGCKATKQVQRLEENPDMYNITYIGFHTCK 184
                8999***********************988889**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.9E-24113184IPR003657WRKY domain
SuperFamilySSF1182907.72E-24119184IPR003657WRKY domain
PROSITE profilePS5081118.67123181IPR003657WRKY domain
SMARTSM007741.2E-34123185IPR003657WRKY domain
PfamPF031068.5E-24124184IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MNKRVITELL LGLDHATQLK FLLQNPVGPD GSVAAKELVT NVQRSFAQTL SMLTSSQPAR  60
GEDEVAQNLL ISGEDASQVA SIDPRSQDST ESRKRSLPLA KDRRGSYKRR KTEQTWTIVS  120
HTIDDNRAWR KYGQKDILNS QFPRSYFRCT RKYEQGCKAT KQVQRLEENP DMYNITYIGF  180
HTCKDSLKAP QMVTCF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-24117184269OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
192110RKRSLPLAKDRRGSYKRRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027905300.11e-144probable WRKY transcription factor 70
TrEMBLA0A4D6NPW11e-142A0A4D6NPW1_VIGUN; WRKY transcription factor 29
STRINGXP_007136415.11e-126(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.17e-50WRKY DNA-binding protein 70