PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun005502
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 184aa    MW: 20129.3 Da    PI: 6.5133
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45791110PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-28975PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.76.7e-0923492955
        AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55
               +r++lg+f tae+Aa+a+++a++ + g
  Vun005502 23 TRIWLGTFETAEDAARAYDEAARLMCG 49
               89********************87765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.3E-15463IPR001471AP2/ERF domain
PROSITE profilePS5103212.747457IPR001471AP2/ERF domain
SuperFamilySSF541713.14E-121658IPR016177DNA-binding domain
CDDcd000187.11E-201957No hitNo description
Gene3DG3DSA:3.30.730.107.8E-192157IPR001471AP2/ERF domain
PfamPF008479.7E-52249IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
XHASDKGIGA LGSPKFATPI LKTRIWLGTF ETAEDAARAY DEAARLMCGA RARTNFPFNP  60
NVSHTSSSSS KLLSATLTAK LHRCYMASLQ MTRQALASSE SQRTASVPNA TSTSQPKSLS  120
VKSDQTHQVL PHKRAEEDQE SEAMARTVES VPLQFKPLEE DHIEQMIEEL LDYGSVELSS  180
VFSP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027939792.11e-119ethylene-responsive transcription factor ERF003-like isoform X2
SwissprotQ94AW52e-50ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A4D6MEU81e-117A0A4D6MEU8_VIGUN; EREBP-like factor
STRINGXP_007161152.12e-90(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-28ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]