PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun005620

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

BBR-BPC

Protein Properties

Length: 179aa MW: 20173.6 Da PI: 9.7568

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45789540	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-1546	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	61.8	3.1e-19	2	174	2	164
GAGA_bind 2 dddgsre..rnkg.yye..............pa.aslkenlglqlmssiaerdaki..rernlalsekkaavaerdmaflqrdkalaernkalverdnkl 81 +d ++e r+k yy+ ++ ++l +++++ s++aer+a+i e ++a+sek++a+a+rd a qrd+al +r++a++erdn+l Vun005620 2 EDGRQNEndRHKIeYYRgphsmwntdsqhqvKEpNALV--MNKKIRSIMAERQAAIleLELEAAISEKNEALAARDAAIRQRDEALVQRDNAILERDNAL 99 55544444599988998999999999876663335666..99************77677889******************************** PP GAGA_bind 82 lalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekka 164 +al+ ++ s + p+g+++ g+k ++++ + + + ++++ +++++ + +++ p +e+ +++++k+++++k++ +k++ Vun005620 100 AALQSRNSS--VNFPFGSGIQCGSKRMHHSSN-HLSIMSETVYKTNDASPIKVIP-----SEVVKSHQTKRTKENKVTGSKTS 174 97776..6789999999*****8887.5578888888877666666655.....33333333333333333333333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01226	8.8E-6	1	179	IPR010409	GAGA-binding transcriptional activator
Pfam	PF06217	9.0E-12	13	173	IPR010409	GAGA-binding transcriptional activator

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence Send to blast
MEDGRQNEND RHKIEYYRGP HSMWNTDSQH QVKEPNALVM NKKIRSIMAE RQAAILELEL 60 EAAISEKNEA LAARDAAIRQ RDEALVQRDN AILERDNALA ALQSRNSSVN FPFGSGIQCG 120 SKRMHHSSNH LSIMSETVYK TNDASPIKVI PSEVVKSHQT KRTKENKVTG SKTSTHPTK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027917706.1	1e-125	protein BASIC PENTACYSTEINE4-like
Refseq	XP_027917707.1	1e-125	protein BASIC PENTACYSTEINE4-like
Refseq	XP_027917708.1	1e-125	protein BASIC PENTACYSTEINE4-like
Refseq	XP_027917709.1	1e-125	protein BASIC PENTACYSTEINE4-like
TrEMBL	A0A4D6L8X0	1e-124	A0A4D6L8X0_VIGUN; GAGA-binding transcriptional activator
STRING	XP_007159983.1	1e-106	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G21240.2	2e-34	basic pentacysteine 4