PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun005693
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 176aa    MW: 19667.8 Da    PI: 9.9281
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45879069PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-14428PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.58.6e-10119164346
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 
                       W++  +  lv+a k ++++   +W+++a  ++ g+t +qck ++ +
        Vun005693 119 VWSAVQERALVQALKAFPKEtsqRWERVATAVP-GKTVNQCKKKFTM 164
                      7********************************.*********9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512936.328149IPR017884SANT domain
SMARTSM007174.2148IPR001005SANT/Myb domain
SuperFamilySSF466892.73E-5241IPR009057Homeodomain-like
CDDcd001670.00133240No hitNo description
PROSITE profilePS512939.86115170IPR017884SANT domain
Gene3DG3DSA:1.10.10.601.7E-6116166IPR009057Homeodomain-like
SMARTSM007171.3E-9116168IPR001005SANT/Myb domain
SuperFamilySSF466892.92E-10118173IPR009057Homeodomain-like
PfamPF002493.5E-8119165IPR001005SANT/Myb domain
CDDcd001675.76E-8120166No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
XEEIDLLRKG MQKYPKGTSR RWEVISEYIG TGRSVEEIMK ATKTVLLQKP DSSKAFDTFL  60
EKRKPGAQSI ESPLSTREEL EGVSTPASTN NTEDSHSKST DNENSASTNG VSSSSEQDVW  120
SAVQERALVQ ALKAFPKETS QRWERVATAV PGKTVNQCKK KFTMMKENFR NKKSAV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027932278.11e-120dnaJ homolog subfamily C member 2-like
TrEMBLA0A4D6KMR51e-119A0A4D6KMR5_VIGUN; DnaJ-like protein subfamily C member 2
STRINGXP_007148540.11e-112(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.16e-75DnaJ domain ;Myb-like DNA-binding domain