PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun005802

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

NAC

Protein Properties

Length: 172aa MW: 20045.6 Da PI: 9.3529

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45938803	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-10129	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	65.1	2.1e-20	3	60	73	128
NAM 73 rknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 r+nr+t+sg+Wkatg dk++++ +e +glkk+Lv+y+g+a kg+ktdW+mhe+rl Vun005802 3 RPNRVTRSGFWKATGIDKSIYCVkePHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 60 89*****************97445566*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	27.861	1	85	IPR003441	NAC domain
SuperFamily	SSF101941	3.14E-23	2	84	IPR003441	NAC domain
Pfam	PF02365	3.1E-9	4	60	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence Send to blast
XVRPNRVTRS GFWKATGIDK SIYCVKEPHE CIGLKKSLVY YRGSAGKGTK TDWMMHEFRL 60 PPNIANVTNN LHEAEVWTLC RIFKRIPSFK KYTPNLKDTK SNTVNSNTST IDSDNCKPYL 120 ICRDTEMMQQ LKPVFGQVDE KKHLYLQPPS STPYPTFWNH NVEDYTFANE NW

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3swm_A	1e-19	3	91	91	174	NAC domain-containing protein 19
3swm_B	1e-19	3	91	91	174	NAC domain-containing protein 19
3swm_C	1e-19	3	91	91	174	NAC domain-containing protein 19
3swm_D	1e-19	3	91	91	174	NAC domain-containing protein 19
3swp_A	1e-19	3	91	91	174	NAC domain-containing protein 19
3swp_B	1e-19	3	91	91	174	NAC domain-containing protein 19
3swp_C	1e-19	3	91	91	174	NAC domain-containing protein 19
3swp_D	1e-19	3	91	91	174	NAC domain-containing protein 19
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269\|PubMed:22345491}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269\|PubMed:22345491}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027931731.1	1e-126	transcription factor JUNGBRUNNEN 1-like
Swissprot	Q9SK55	7e-36	NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBL	A0A4D6KSE9	1e-124	A0A4D6KSE9_VIGUN; Uncharacterized protein
STRING	XP_007146230.1	1e-108	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12910.1	2e-37	NAC family protein

Publications ? help Back to Top
Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins. Plant Signal Behav, 2016. 11(6): p. e1181245 [PMID:27159137] Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling. Nat Plants, 2016. 2: p. 16013 [PMID:27249348] Shahnejat-Bushehri S, et al. Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Front Plant Sci, 2017. 8: p. 214 [PMID:28326087] Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways. Plant J., 2017. 92(6): p. 1106-1120 [PMID:29032592] Ebrahimian-Motlagh S, et al. JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13. Front Plant Sci, 2017. 8: p. 2118 [PMID:29326734]