PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun005858
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 170aa    MW: 19216.7 Da    PI: 10.1823
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45862335PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-6817PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.8e-121159555
               HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
        HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                + +Er RR+++++ f++L ++lP++   +s+   s  +   +A++YIk+Lq
  Vun005858 11 RKLVERDRRNQMKDLFSKLNSVLPPQ---SSREgISRPDQIGEAIDYIKNLQ 59
               6789*********************8...77888*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.93E-13472IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.81E-7563No hitNo description
PROSITE profilePS5088811.858658IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-11873IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-81159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-51264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
XNNPSSSKRG RKLVERDRRN QMKDLFSKLN SVLPPQSSRE GISRPDQIGE AIDYIKNLQI  60
KLEKMKEKKG NLTDIVRSRN ATMNMEFKSP QFKIQQIGSV LEVVLVTGLD CPFIFNETIR  120
ILQEEGSDIV NASYTVLQNA VLHKIHSQVD ESGNAASRIS EKLKNCVNGR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027915420.11e-120transcription factor bHLH162-like
TrEMBLA0A4D6L7721e-104A0A4D6L772_VIGUN; Achaete-scute transcription factor-related
STRINGXP_007159331.18e-97(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-38bHLH family protein