PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun005901
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 167aa    MW: 18417.1 Da    PI: 8.6246
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45820980PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-15613PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.82.5e-0556951054
               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
               + R ++i +++  L++l+ +      +K + +++L++A+eYI  L
  Vun005901 56 KERKEKIGERIVALQQLVSPY-----GKTDTSSVLKEAMEYIGFL 95
               789999************999.....9***************887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.9E-1045115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.6554695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.13E-1148110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.002952101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.71E-556100No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MIASSFCNAD SMFSREEGID VRKMMEHKRS PCSVDQSSYT SIASKRQKAD LSISTKERKE  60
KIGERIVALQ QLVSPYGKTD TSSVLKEAME YIGFLHKQVK LLSAPYLETS AAAKMQGMES  120
CSLRSRGLCL VPVSFTIGVA ESNGADIWAP IKTTTSPKLE NDVSQFH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027919621.11e-122transcription factor bHLH153 isoform X3
SwissprotQ7XJU23e-59BH153_ARATH; Transcription factor bHLH153
TrEMBLA0A0S3R2Y21e-120A0A0S3R2Y2_PHAAN; Uncharacterized protein
TrEMBLA0A1S3UWH81e-120A0A1S3UWH8_VIGRR; transcription factor bHLH153 isoform X1
STRINGGLYMA07G32980.11e-116(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.51e-61bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]