PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun006040
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 160aa    MW: 18021.2 Da    PI: 4.8503
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45799528PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-11414PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.11.1e-143087562
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
               ++ +r+q+NRe+ArrsR RK++ +e L    +eL++eN+++ k++ + ++   k+++e
  Vun006040 30 RKRKRMQSNRESARRSRMRKQQHLEGLSAQLDELKKENSEMNKNIGMTTQVFLKVEAE 87
               5789*****************************************9988877777666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-112576No hitNo description
SMARTSM003389.6E-172690IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.8062874IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-123081No hitNo description
PfamPF001702.6E-103075IPR004827Basic-leucine zipper domain
CDDcd147029.86E-183179No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MGSPGGACSS GSSSLQNSGS EGEREMVDER KRKRMQSNRE SARRSRMRKQ QHLEGLSAQL  60
DELKKENSEM NKNIGMTTQV FLKVEAENAI LRAQMAELSN RLNSLNEIIG FINSTNYLVL  120
DEAQETQMFN DCGFMDAWNG IPFNQQPIMA SADNDILMMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14249RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027921101.11e-115bZIP transcription factor 44-like
SwissprotC0Z2L52e-41BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A4D6L7K11e-114A0A4D6L7K1_VIGUN; Extracellular signal-regulated kinase 1/2
STRINGXP_007159436.12e-88(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-39basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]