PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun006172
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family C2H2
Protein Properties Length: 155aa    MW: 17338 Da    PI: 8.9384
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45922686PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-5860PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.000784466123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               ++C+ C++ Fs+   L  H  +H
  Vun006172 44 FECKTCNRKFSSFQALGGHRASH 66
               89**********99999998887 PP
2zf-C2H214.88.4e-0592114123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ++C++Cg+ Fs    L  H+r+H
  Vun006172  92 HECSICGQEFSLGQALGGHMRKH 114
                78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.13E-944114No hitNo description
PROSITE profilePS5015710.6994471IPR007087Zinc finger, C2H2
SMARTSM003550.194466IPR015880Zinc finger, C2H2-like
PfamPF139126.9E-114468IPR007087Zinc finger, C2H2
PROSITE patternPS0002804666IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.3E-490116IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.06792114IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.47192119IPR007087Zinc finger, C2H2
PfamPF139121.2E-992116IPR007087Zinc finger, C2H2
PROSITE patternPS00028094114IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MVALKRQRGS EGSESLDLAK CLMLFSCPQE SNKAEEKGFG SLEFECKTCN RKFSSFQALG  60
GHRASHKRQK VEGEELKEQG KSLSLWSKPK MHECSICGQE FSLGQALGGH MRKHRGITNE  120
AFVPIPSIDQ VIAKFPVLKR SNSTRVMCLD LELHL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027907768.11e-110zinc finger protein ZAT11-like
TrEMBLA0A4D6MBS01e-109A0A4D6MBS0_VIGUN; Uncharacterized protein
STRINGXP_007162678.11e-100(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.14e-34C2H2 family protein