PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun006174
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 155aa    MW: 17247 Da    PI: 6.8084
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45907532PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-6870PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39e-191667256
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +y+G+r+++ +g+++AeIrdp+     +r++lg+f tae+Aa+a++aa+  ++g+
  Vun006174 16 RYRGIRRRP-WGKFAAEIRDPTRK--GTRIWLGTFETAEQAARAYDAAAFHFRGH 67
               69*******.**********8542..4***********************99996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.30E-201575No hitNo description
PfamPF008475.0E-131667IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-231675IPR016177DNA-binding domain
PROSITE profilePS5103225.4351674IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-321676IPR001471AP2/ERF domain
SMARTSM003801.7E-361680IPR001471AP2/ERF domain
PRINTSPR003671.2E-111728IPR001471AP2/ERF domain
PRINTSPR003671.2E-114056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MEGGRSSGSN GNGEARYRGI RRRPWGKFAA EIRDPTRKGT RIWLGTFETA EQAARAYDAA  60
AFHFRGHRAI LNFPNEYQSS NPNSSLPMPL TTLPPPSSSS SSSSSSYSSY SIDNIAGPGF  120
SGEMMQGDDT FELEYLDNKL LEELLQMQDN RHLFK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-29277375Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027938091.11e-111ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC52e-38ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A4D6MZD11e-110A0A4D6MZD1_VIGUN; EREBP-like factor
STRINGGLYMA13G18400.13e-75(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-27ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]