PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun006304
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 147aa    MW: 16380.4 Da    PI: 4.2505
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45807328PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-23208PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH171.1e-053411054
               HHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
        HLH 10 rrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                rRR+++  +++eLr++  + a       ++Ka+i   A++YI +L
  Vun006304  3 SRRRRNMQRRLQELRRVTNSsA-------VNKASIIVDATRYIEEL 41
               69**************988844.......9*************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.05E-7460IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-8461IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516718.61978147IPR002912ACT domain
CDDcd048732.00E-687143No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MDSRRRRNMQ RRLQELRRVT NSSAVNKASI IVDATRYIEE LKQKVDGLNS ELGTAESSIS  60
QGELPMVTVE TLERGFLINV FSERNCPGML AAILDAFEEL GLDVLDARVS CEDTFQLEAV  120
GGESEENESI DAQVVKQAVM QAIQNMD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027907020.11e-102uncharacterized protein LOC114166482
TrEMBLA0A4D6MQ631e-101A0A4D6MQ63_VIGUN; Myc-type
STRINGXP_007134819.11e-95(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.15e-06beta HLH protein 93