PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun006436
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 138aa    MW: 15741.1 Da    PI: 5.1833
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45825934PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-21509PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.33.1e-0775104131
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartm 31 
                      +++W  eE++ l++a+  +G++ W+ Ia+ +
        Vun006436  75 KDPWILEEELALIKAHCIHGNK-WAEIAKVL 104
                      679*******************.*****976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.4E-970105IPR009057Homeodomain-like
PROSITE profilePS500906.63270108IPR017877Myb-like domain
SuperFamilySSF466892.61E-771108IPR009057Homeodomain-like
PfamPF002491.7E-575104IPR001005SANT/Myb domain
CDDcd001670.0031677106No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MYSAFPAGDW ACMEGNNFWW LQESITSSLA CRKVHEEGGL LCFCDEKVFY NNEGCVAEAR  60
MMTHGAIIXS PDIKKDPWIL EEELALIKAH CIHGNKWAEI AKVLCGSKPV MQMSLSLLWV  120
QEDNLVVATF RVLMMFFR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027936773.16e-70transcription factor MYB122-like isoform X2
RefseqXP_027936776.16e-70transcription factor MYB122-like isoform X2
RefseqXP_027936777.16e-70transcription factor MYB122-like isoform X2
RefseqXP_027936778.16e-70transcription factor MYB122-like isoform X2
RefseqXP_027936779.16e-70transcription factor MYB122-like isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09370.12e-12myb domain protein 3r-3