PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun007075

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bHLH

Protein Properties

Length: 460aa MW: 51166.9 Da PI: 9.8973

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-167a-Vigna_unguiculata-7817	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	55.2	1.3e-17	161	210	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq Vun007075 161 RSKHSATEQRRRSKINDRFQMLRELIPHS----DQKRDKASFLLEVIEYIHFLQ 210 889***********************9....9****************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	3.6E-23	156	232	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.84E-19	159	234	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	16.653	159	209	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.95E-15	161	214	No hit	No description
Pfam	PF00010	3.9E-15	161	210	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.5E-13	165	215	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence Send to blast
XLFFSCSSHL PASPTPIQIL SRPTTTAVDL DLRPPNAADF SRFPRRRHRH XLPKENNSGD 60 RPSTGECAAT KLGQWTSTER TSQSFCTNRH DSFSSRSSSQ TTGQKNQSFM EMMKSARDSA 120 QDEVLENEET FFLKKEPSNN QRELRVKVDG KSTDQKPNTP RSKHSATEQR RRSKINDRFQ 180 MLRELIPHSD QKRDKASFLL EVIEYIHFLQ EKVHKYERFI SRVENEQEKL MPWQRNNDKP 240 AENFQHRGTD NGSPSPALLF SSKNEEKNIS ISPTIPGSTQ NVESGLSTAT TSKTMDHQAG 300 IMNKAFPIPI SSQLNFFPPA NMGGPGGVVS QLAHIPASDA ENKYQSSVEC QTMAATSEKL 360 KEKELAIEGG AISISSVYSK GLLHTLIHAL QSSGVDLSQA SISVQIELGK QANMRPTVPV 420 SVCGAKDGEV PSNNQKMMRS RVASSGKSDQ AIKKLKICRN

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence Send to blast

XLFFSCSSHL PASPTPIQIL SRPTTTAVDL DLRPPNAADF SRFPRRRHRH XLPKENNSGD  60
RPSTGECAAT KLGQWTSTER TSQSFCTNRH DSFSSRSSSQ TTGQKNQSFM EMMKSARDSA  120
QDEVLENEET FFLKKEPSNN QRELRVKVDG KSTDQKPNTP RSKHSATEQR RRSKINDRFQ  180
MLRELIPHSD QKRDKASFLL EVIEYIHFLQ EKVHKYERFI SRVENEQEKL MPWQRNNDKP  240
AENFQHRGTD NGSPSPALLF SSKNEEKNIS ISPTIPGSTQ NVESGLSTAT TSKTMDHQAG  300
IMNKAFPIPI SSQLNFFPPA NMGGPGGVVS QLAHIPASDA ENKYQSSVEC QTMAATSEKL  360
KEKELAIEGG AISISSVYSK GLLHTLIHAL QSSGVDLSQA SISVQIELGK QANMRPTVPV  420
SVCGAKDGEV PSNNQKMMRS RVASSGKSDQ AIKKLKICRN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027920477.1	0.0	transcription factor BIM1 isoform X1
TrEMBL	A0A0L9TRM7	0.0	A0A0L9TRM7_PHAAN; Uncharacterized protein
TrEMBL	A0A0S3R759	0.0	A0A0S3R759_PHAAN; Uncharacterized protein
STRING	XP_007155200.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.1	7e-72	bHLH family protein