PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun007315
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 377aa    MW: 41981.4 Da    PI: 9.4785
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-32145PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH512.7e-16210256455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 hn+ ErrRRd+iN+++ eL++l+P++      K +Ka++L ++++Y+k+Lq
  Vun007315 210 VHNQSERRRRDKINQRMKELQKLVPNS-----SKTDKASMLDEVIQYMKQLQ 256
                6*************************8.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088818.12206255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-18208273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.6E-14210256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-18210263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.63E-16211260No hitNo description
SMARTSM003536.6E-18212261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MSQRVPSCDV DDNTIPIPSK FPLISTSNFM TYEVPMLGYK VACKKGQPST PGNQTTWEIP  60
RTSGTLESIV NHGIAKNCHN LLTKDALVPC FPKQGTVFGA CKKGYPGRVD SGVVARGPPT  120
YDLSGGKDSS MSGSDTCPRE LSVTFNSATM GSPENTSSSG KQCTETTAND DRDSVSHRRS  180
QSEATGKKDC KTSGVDRSCE SNKRIKASAV HNQSERRRRD KINQRMKELQ KLVPNSSKTD  240
KASMLDEVIQ YMKQLQAHLQ MMNWMKMYSS MMLPITMQQQ QLKMSMMMAQ MGIGMRMNKD  300
MAMNMNMNMD MNMNMNMNNM NIPTIAPMLH LPPFMPMAPC GDRLLAEPEK SVTVDAYRKM  360
AALYNQMYQL SDSSSKK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214219ERRRRD
2215220RRRRDK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027906579.10.0transcription factor UNE10-like
TrEMBLA0A0S3SXT20.0A0A0S3SXT2_PHAAN; Uncharacterized protein
STRINGXP_007134726.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.11e-36bHLH family protein