PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun007329

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

C2H2

Protein Properties

Length: 375aa MW: 41822.7 Da PI: 4.5231

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-167a-Vigna_unguiculata-3295	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	7e-05	37	60	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C +C++sF k+++ +H+ + H Vun007329 37 FECRKCNMSFDEKDSYLQHLLSvH 60 89******************9888 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00355	0.017	37	60	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	9.411	37	65	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	39	60	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	8.642	84	111	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.37	84	106	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	86	106	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence Send to blast
XVNTEVPGLF AGAHERVKEV ALLGIENLAD VQIQDLFECR KCNMSFDEKD SYLQHLLSVH 60 QRTTRRYRLG SSVGDGVIIK DGKFECQFCH KVFLERRRYN GHVGIHVRNY VRRVEDSPGQ 120 INVLRTDDKS PVREDVPLRI SKMDALIEIA QNSIMEGCVT EPHHLAKLNG IPASDIAVGY 180 LDQDGNSESP ISEKQMEDSL TKKNVDHHGM DGKVEEVDDD NHVIDVKMVT FLDNMGFLSV 240 NKQDVKASEA SEVKDDVELT IEELDQSGID LDGVSEVRIL PLSELNMIPE SEKGENSESS 300 NAKVQFKPDE GISNKSELEF GLNCLKDVPV TVSTNVQEMV MAASEENVVH SRAFNSTIST 360 EQLMDCLPAF SSDKV

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence Send to blast

XVNTEVPGLF AGAHERVKEV ALLGIENLAD VQIQDLFECR KCNMSFDEKD SYLQHLLSVH  60
QRTTRRYRLG SSVGDGVIIK DGKFECQFCH KVFLERRRYN GHVGIHVRNY VRRVEDSPGQ  120
INVLRTDDKS PVREDVPLRI SKMDALIEIA QNSIMEGCVT EPHHLAKLNG IPASDIAVGY  180
LDQDGNSESP ISEKQMEDSL TKKNVDHHGM DGKVEEVDDD NHVIDVKMVT FLDNMGFLSV  240
NKQDVKASEA SEVKDDVELT IEELDQSGID LDGVSEVRIL PLSELNMIPE SEKGENSESS  300
NAKVQFKPDE GISNKSELEF GLNCLKDVPV TVSTNVQEMV MAASEENVVH SRAFNSTIST  360
EQLMDCLPAF SSDKV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014518609.1	0.0	uncharacterized protein LOC106775889
Refseq	XP_014518610.1	0.0	uncharacterized protein LOC106775889
Refseq	XP_014518611.1	0.0	uncharacterized protein LOC106775889
TrEMBL	A0A4D6KFT3	0.0	A0A4D6KFT3_VIGUN; Uncharacterized protein
STRING	XP_007148405.1	0.0	(Phaseolus vulgaris)