PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun007412
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 360aa    MW: 39913.6 Da    PI: 7.6735
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-1635354PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.91.5e-31663260
               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
       WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
               dDg+nWrKYGqK+vkgsefprsYY+Ct+++C+vkk  ers+ d++++ei+Y+g+H+h+k
  Vun007412  6 DDGHNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 63
               8****************************************.***************85 PP
2WRKY106.61.2e-33178236159
                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                ldDgy+WrKYGqK+v+g+++prsYY+Ct +gCpv+k+ver+++dpk+v++tYeg+Hnh+
  Vun007412 178 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHD 236
                59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.63164IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.4E-26364IPR003657WRKY domain
SuperFamilySSF1182902.22E-24464IPR003657WRKY domain
SMARTSM007741.2E-33563IPR003657WRKY domain
PfamPF031061.8E-24662IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.4E-38163238IPR003657WRKY domain
SuperFamilySSF1182901.11E-29170238IPR003657WRKY domain
PROSITE profilePS5081138.664173238IPR003657WRKY domain
SMARTSM007743.5E-39178237IPR003657WRKY domain
PfamPF031062.2E-26179236IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
XERVSDDGHN WRKYGQKHVK GSEFPRSYYK CTHPNCEVKK LFERSHDGQI TEIIYKGTHD  60
HPKPQPNRRY SSGTIMTMQE ERTDKASFRD DKGSNICGQV SHPAEPDSTP ELSPAATNDG  120
DPEGTGFFSN RNSDEVDDGD PLSKRRKMEF ANADITPVVK PIREPRVVVQ TLSEVDILDD  180
GYRWRKYGQK VVRGNPNPRS YYKCTNTGCP VRKHVERASH DPKAVITTYE GKHNHDVPTA  240
RNNSCHDIAG SASGGGHTRI RAEESDTISL DLGMGISPAS ENTPNSQGRM TLPEFGGNHA  300
HTSNSNFKFV HTSGAPVYFG VLNNNSNPYG SRENPSDSST SLNHSAYPCP QNVGRILMGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-374238877Probable WRKY transcription factor 4
2lex_A3e-374238877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027932474.10.0probable WRKY transcription factor 20 isoform X1
RefseqXP_027932475.10.0probable WRKY transcription factor 20 isoform X2
RefseqXP_027932476.10.0probable WRKY transcription factor 20 isoform X3
RefseqXP_027932477.10.0probable WRKY transcription factor 20 isoform X3
RefseqXP_027932478.10.0probable WRKY transcription factor 20 isoform X3
RefseqXP_027932479.10.0probable WRKY transcription factor 20 isoform X3
SwissprotQ93WV01e-147WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A4D6KL700.0A0A4D6KL70_VIGUN; WRKY transcription factor 33
STRINGXP_007146592.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.11e-150WRKY family protein