PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun007487
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family C2H2
Protein Properties Length: 348aa    MW: 39393.4 Da    PI: 4.8104
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-4382PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.0015426123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               ++C+ C +sF +   L  H+r+H
  Vun007487  4 HRCKLCLRSFANGRALGGHMRSH 26
               79********************9 PP
2zf-C2H2140.00015217239123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ykC+ C+k+F++   L  H  +H
  Vun007487 217 YKCETCDKVFRSYQALGGHRASH 239
                9***********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.429431IPR007087Zinc finger, C2H2
PfamPF139121.3E-7427IPR007087Zinc finger, C2H2
SMARTSM003550.087426IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280626IPR007087Zinc finger, C2H2
PfamPF139122.2E-11216241IPR007087Zinc finger, C2H2
SuperFamilySSF576674.03E-8216290No hitNo description
PROSITE profilePS5015710.512217244IPR007087Zinc finger, C2H2
SMARTSM003550.012217239IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280219239IPR007087Zinc finger, C2H2
PfamPF139121.0E-10268290IPR007087Zinc finger, C2H2
PROSITE profilePS501579.058268290IPR007087Zinc finger, C2H2
SMARTSM003550.34268290IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280270290IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MEKHRCKLCL RSFANGRALG GHMRSHMMNL PLPPKESEFV PVQLSFEADS SPSQSSSSFY  60
GLRENPKKSF RFADPEFSFA AETGSVILQD RESETESSKN PTRKRSKRAW QLGEPPKKMK  120
LCGNNNKNES ASSASDTTAE EAVAFCLMML SRDRWKRYDD HKNIQQYDDE VEDDDDDDDD  180
EEEDEEEDDE EEEEEKDGFE LEEMKSVKRS NKVRGRYKCE TCDKVFRSYQ ALGGHRASHK  240
KMKLNSETEF QKPELESEHV VVSEKKIHEC PVCFRVFGSG QALGGHKRTH VIGSSATHTT  300
ATVRTSATAS VKVGDSLIDL NLPAPVDDEE DISQFDHSAL SDAEFVKE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027906792.10.0zinc finger protein ZAT9-like
TrEMBLA0A4D6MNG00.0A0A4D6MNG0_VIGUN; Uncharacterized protein
STRINGXP_007134733.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.14e-61C2H2-like zinc finger protein