PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun007878
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Dof
Protein Properties Length: 306aa    MW: 33437.9 Da    PI: 7.0281
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-27091PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1291.4e-403596263
     zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
               +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  Vun007878 35 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 96
               7899******************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027013.7E-343793IPR003851Zinc finger, Dof-type
ProDomPD0074781.0E-263993IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.6463993IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104177IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MDPSTGQHQQ MSNQSLENML ACSKAQQERK PRPQPEQALK CPRCDSTNTK FCYYNNYSLS  60
QPRYFCKSCR RYWTKGGTLR NVPVGGGCRK NKRSSSSSSS SSSKRIQDQG FTPNPNNPLT  120
GLPSLSYDSS DLTLDWQGCK SSHVGQLGYD EHDFSILGNP TSTPCDILGN PGMHHSSTNP  180
GFLDSLRSGF LGTQSNVQNL YYGYGNGDMG EVDNGNACAG AGGGVSGEMM LPYDQEMSVA  240
TTQAVTVTTM KQELCNAREQ SESSRVLWGF PWQLNGDTNM AELDSGRANW NGLTSSWHGL  300
LNSPLM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027911338.10.0dof zinc finger protein DOF2.1
TrEMBLA0A0S3SCW30.0A0A0S3SCW3_PHAAN; Uncharacterized protein
STRINGXP_007132171.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.16e-35TARGET OF MONOPTEROS 6