PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun008049
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 291aa    MW: 33688.3 Da    PI: 10.8562
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-35076PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.93.9e-07167214448
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      WT  E ++lv+++ ++G g+W+ I + +      Rt+ +++++w+++l
        Vun008049 167 WTLPEVLKLVEGISEYGVGRWTDIKKFLFsssSYRTPIDLRDKWRNLL 214
                      9***************************99**99************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.326158218IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-11158218IPR009057Homeodomain-like
SMARTSM007172.2E-8163216IPR001005SANT/Myb domain
CDDcd116605.41E-17165215No hitNo description
PfamPF002495.2E-6166214IPR001005SANT/Myb domain
SuperFamilySSF466892.47E-16166234IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
GNNPSQPSQG NCRYNISLDI QHLQELDNYR HLAGLTYKKE KGPTEKGQPA ALREKRFRKP  60
TQRYIEEFSN ARPKEKVPPA GTKTKHSSDS SCNVLHIRIK SLKRSPSEKS SNENSEVMLP  120
ELQVRKGHQK KEKLQFEYES FPSESEDGCS TTKRSRRKDR RKHQKMWTLP EVLKLVEGIS  180
EYGVGRWTDI KKFLFSSSSY RTPIDLRDKW RNLLRASSVQ KNKKEAEQND ELALRPLPFN  240
VVHRVRELAK IHPYPRQRGS KKLRVSQAGT SVVADSPPVS LSKRNVRRKF T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152160KRSRRKDRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027935241.10.0uncharacterized protein LOC114190519 isoform X4
RefseqXP_027935243.10.0uncharacterized protein LOC114190519 isoform X4
RefseqXP_027935244.10.0uncharacterized protein LOC114190519 isoform X4
TrEMBLA0A4D6MZE90.0A0A4D6MZE9_VIGUN; Uncharacterized protein
STRINGXP_007144365.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.21e-23TRF-like 6