PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun008262
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Dof
Protein Properties Length: 277aa    MW: 30698.1 Da    PI: 8.383
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-22448PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof114.16.1e-3642101261
     zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                +++ lkcprCds ntkfCyynny+ sqPr+fC+aC+r+WtkGG+lrnvPvGggr++++++
  Vun008262  42 PSEPLKCPRCDSINTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRAK 101
                67899************************************************8777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-224399IPR003851Zinc finger, Dof-type
PfamPF027011.0E-314599IPR003851Zinc finger, Dof-type
PROSITE profilePS5088427.37246100IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104884IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MGLSSKQVSN RGLDWDQTLL QAQNLELPKP TPMRKQQQQT QPSEPLKCPR CDSINTKFCY  60
YNNYNKSQPR HFCRACKRHW TKGGTLRNVP VGGGRKNKRA KKSTTTTTTT TSNGSMDGEL  120
RTRVTVPPLA VDDHKTTPSS LYQSLCLPQQ NPTSTKVSEG KDFGIGNGIF LSSTVPFPQN  180
QSLLFPFTTS NSFDTCAVSN SLQSSGVYNY GEEFKILEEP TVNSTMACTS GGTRTQPWEI  240
GGTSSGLEMS NYWSWEDIDS LVSTDPNNPW DDSDIKP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027933759.10.0dof zinc finger protein DOF5.8-like
TrEMBLA0A4D6KNP10.0A0A4D6KNP1_VIGUN; Uncharacterized protein
STRINGXP_007148198.11e-171(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.17e-30TARGET OF MONOPTEROS 6