PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun008510

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bHLH

Protein Properties

Length: 265aa MW: 30107.3 Da PI: 7.3399

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-167a-Vigna_unguiculata-22722	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.2	5.1e-07	106	141	15	55
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +i ++f L +P + kK +Ka+iL +A++Y+++Lq Vun008510 106 DIAEKFIALSATIPGL-----KKIDKASILGEAIKYMRQLQ 141 6889999999999999.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.188	91	140	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	3.0E-5	98	146	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	8.9E-5	106	141	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	2.49E-9	106	156	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	7.98E-5	106	145	No hit	No description
Gene3D	G3DSA:4.10.280.10	3.2E-9	107	150	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence Send to blast
MEDSWQNWLS HLGMNDNFGC TNNGARYEEM VRLNNNMQGC CDSSNNEVAS CMEVKEEHSE 60 CCWRKRGVGK LRNWREREGR REEQKGQEPL LRLNITSSQR EKGDXDIAEK FIALSATIPG 120 LKKIDKASIL GEAIKYMRQL QQRIAVLEKG SNSNSVKSFM IAKSHLCSAS CEAKSSVEML 180 PEVEASGLEN EVLIRIYCEK RKDMMLNLMT LLKHVHLSVT SSSVLPFGNS LLNIIIVAQM 240 SEEYSLTVTD LVKTLKQNLL KFYEV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027907446.1	1e-167	transcription factor bHLH25-like
TrEMBL	A0A4D6MN80	1e-142	A0A4D6MN80_VIGUN; Transcription factor MYC2
STRING	XP_007135786.1	1e-119	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	6e-28	bHLH family protein