PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun008545
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 264aa    MW: 29058.1 Da    PI: 8.0434
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-329PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.4e-1897145254
        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                +ykGVr +k +g+W+AeIrd +     + +r++lg++ taeeA +a++  r+++e
  Vun008545  97 KYKGVRMRK-WGKWAAEIRDpF-----KgARVWLGTYNTAEEASQAYETKRLEFE 145
                8******99.**********55.....45**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.8E-1197146IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-1697144IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-2197145IPR001471AP2/ERF domain
CDDcd000183.79E-2297137No hitNo description
PROSITE profilePS5103219.94197154IPR001471AP2/ERF domain
SMARTSM003808.5E-1997167IPR001471AP2/ERF domain
PRINTSPR003671.2E-998109IPR001471AP2/ERF domain
PRINTSPR003671.2E-9120136IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MKKLKQKRNP FHDSKMTRKL RIICDDPDAT DSSSDEEEHF RKGRKVKRTM VEIALPSLPV  60
NSVIAAETST ESSNNEELNK KRVLAKTPSV RRQSCGKYKG VRMRKWGKWA AEIRDPFKGA  120
RVWLGTYNTA EEASQAYETK RLEFEAMAKA LSGERSSNNN IIINNNSNNN VVASVVTVAA  180
SEKNNSNYSV SSGAAESATD SKSATNTIDY SDSSILSHTS PYSVLELDTS ASDLTVSGKV  240
SCNEVVELKG LEAEGVETEF AELX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-12961511369Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027914442.10.0ethylene-responsive transcription factor ERF118-like
RefseqXP_027914443.10.0ethylene-responsive transcription factor ERF118-like
TrEMBLA0A4D6LPF70.0A0A4D6LPF7_VIGUN; EREBP-like factor
STRINGXP_007153441.11e-125(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.21e-31ERF family protein