PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun008565
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 263aa    MW: 30234.7 Da    PI: 9.1519
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-14565PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.63.2e-1093114223
                --SS-EEEEEEE--TT-SS-EE CS
       WRKY   2 dDgynWrKYGqKevkgsefprs 23 
                +DgynWrKYGqK++ g+++pr+
  Vun008565  93 EDGYNWRKYGQKDILGAKYPRK 114
                7*******************95 PP
2WRKY94.57.8e-30136196259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                +DgynWrKYGqK++ g+++prsYYrCt++   gC+++k+v+rs+edp++++itY+g+H+++
  Vun008565 136 EDGYNWRKYGQKDILGAKYPRSYYRCTFRntqGCWATKQVQRSDEDPTIFDITYRGKHTCS 196
                7**************************998889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508119.66187127IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.0E-888114IPR003657WRKY domain
SuperFamilySSF1182903.01E-791113IPR003657WRKY domain
SMARTSM007741.6E-492129IPR003657WRKY domain
PfamPF031064.3E-793114IPR003657WRKY domain
PROSITE profilePS5081122.848130193IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.7E-29132197IPR003657WRKY domain
SuperFamilySSF1182907.19E-26134197IPR003657WRKY domain
SMARTSM007741.8E-40135197IPR003657WRKY domain
PfamPF031064.9E-27136195IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
XLLQRILSSY EKALLILRCN ASTSELQATS QATATLLPES PISVHGSPLS EDLDGAVKDH  60
QEIKHDSKKR KITPKWMDHV RVSCESGLEE PQEDGYNWRK YGQKDILGAK YPRKITPKWM  120
DHVRVSCESG LEGPQEDGYN WRKYGQKDIL GAKYPRSYYR CTFRNTQGCW ATKQVQRSDE  180
DPTIFDITYR GKHTCSQGNN AVCHLSHQTN KRRHTVITLT FTITGITRKP YKVQKHLVCH  240
TDKLDNGDMA YPFTFPSTHQ MHX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-181371931874Disease resistance protein RRS1
5w3x_D3e-181371931874Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027919264.11e-116probable WRKY transcription factor 41
TrEMBLA0A4D6L9971e-114A0A4D6L997_VIGUN; WRKY transcription factor 29
STRINGXP_007160152.11e-108(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-51WRKY family protein