PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun008800
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family B3
Protein Properties Length: 253aa    MW: 28932.3 Da    PI: 8.5664
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-12185PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.36.4e-142791799
               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                +pk+f+++  +++  s  +    +s ++Wev +   kk++++++++GW +Fv +n L   + ++F+++g+++f  +v++f +
  Vun008800  2 KVPKEFLKNL-NEELLSNAVLSIPSSDEKWEVSV--VKKGSEVYMQNGWPQFVTDNSLVLHELLLFEYHGDNCF--HVQIFGT 79
               689***9544.4455665666666788*******..999999********************************..**99976 PP
2B366.63.5e-21151248299
                EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                + v+t+ +v  +++l +  kfa+++   +ee k++ + +++g  W+v+++y + +s++   l++GW +Fv++n+L  gD+++F+l+++++ +++v++fr+
  Vun008800 151 KHVMTKCHVEGRCILPIASKFARKYI--PEEVKQIHMGNSEGTLWKVQVSYfKIQSRSyANLSTGWAKFVRDNKLMRGDTCIFELEENKDLHMKVHIFRT 248
                67899999*****************4..334557****************9866666667799***********************99**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100173.15E-10177No hitNo description
Gene3DG3DSA:2.40.330.109.1E-17180IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.747180IPR003340B3 DNA binding domain
SuperFamilySSF1019361.2E-15181IPR015300DNA-binding pseudobarrel domain
SMARTSM010195.2E-5180IPR003340B3 DNA binding domain
PfamPF023625.2E-11278IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.8E-23142249IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.96E-21147247IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.493150249IPR003340B3 DNA binding domain
SMARTSM010192.7E-10150249IPR003340B3 DNA binding domain
PfamPF023624.9E-18152248IPR003340B3 DNA binding domain
CDDcd100175.88E-19153247No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MKVPKEFLKN LNEELLSNAV LSIPSSDEKW EVSVVKKGSE VYMQNGWPQF VTDNSLVLHE  60
LLLFEYHGDN CFHVQIFGTN GLERLCVKET TQEQPTTIPK KTIPTSAGSS LHKSKSCKKD  120
LSQPKESPIE IESSEALKLA ESFTSCKPHW KHVMTKCHVE GRCILPIASK FARKYIPEEV  180
KQIHMGNSEG TLWKVQVSYF KIQSRSYANL STGWAKFVRD NKLMRGDTCI FELEENKDLH  240
MKVHIFRTRC APS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027909046.10.0putative B3 domain-containing protein Os03g0621600
RefseqXP_027909047.10.0putative B3 domain-containing protein Os03g0621600
RefseqXP_027909048.10.0putative B3 domain-containing protein Os03g0621600
RefseqXP_027909049.10.0putative B3 domain-containing protein Os03g0621600
TrEMBLA0A4D6LII41e-171A0A4D6LII4_VIGUN; Uncharacterized protein
STRINGXP_007131907.11e-115(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-12B3 family protein