PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun008852
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 251aa    MW: 27606.3 Da    PI: 5.4124
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-28402PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.53.9e-10158199445
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                 k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Vun008852 158 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 199
                6889*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-8149202No hitNo description
SMARTSM003388.6E-8155218IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415157201IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.94E-7159202No hitNo description
PfamPF001703.3E-7159199IPR004827Basic-leucine zipper domain
CDDcd147084.15E-22159211No hitNo description
PROSITE patternPS000360162177IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MPSFNSQQPN SNACYTEGST VDSFRLSDFD QSVGYRIEDA VALSGNSILD SLKVSSQTIS  60
RGPIQLGSFD KLPTSLDKSI LTNQTERQSL QFQKVHTSNL VTGDTEHQEE FAMADASPRT  120
DISTDADTDD KNPQFDRSQA LAAVASDSSD RSKDKTDQKT LRRLAQNREA ARKSRLRKKA  180
YVQQLESSRL KLTQLEQELQ RARQQGVFIS SSGDQAHSMS GNGAMAFDAE MQVAGRADRQ  240
VNELGAAVNF S
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027936801.11e-169transcription factor TGA6-like
RefseqXP_027936802.11e-169transcription factor TGA6-like
RefseqXP_027936803.11e-169transcription factor TGA6-like
RefseqXP_027936804.11e-169transcription factor TGA6-like
SwissprotQ6IVC22e-64TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A4D6MW111e-167A0A4D6MW11_VIGUN; Transcription factor TGA
STRINGXP_007142625.11e-152(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.23e-38TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]